VHRdb documentation

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A good way to start using the VRHdb is to look at existing data through the Explore interface.

Contents:

• Explore
  • Selecting and comparing data sources, viruses and hosts
  • What is a relevant host/virus/data source
  • Advanced options
• Importing data into Viral Host Range database
  • General information
  • Visibility of your data source
  • Description of the data source
  • How to provide the data
  • Upload a compatible file
  • Generating a template to share your data
  • Filling and uploading the template
  • Mapping responses to the global scheme.
• Search
  • Quick tip
  • Operating the Search tool
  • How search is performed
  • Tuning search
  • Greek letters
  • Available filters
• What is a compatible file?
  • Short version
  • Detailed version
• Identifying viruses and hosts
  • Nature of identifiers
  • How to add identifiers ?
  • Implementing a specific identifier in Viral Host Range database
  • How to specify an identifier in a compatible file ?
• Permissions attached to a data source
  • Roles
  • Permissions with viruses, hosts, and responses
  • Consequences of someone editing a virus/host
• History of data sources, and backup policy
  • What is backed up ?
  • What happens when you restore a backup ?
  • What happens when I delete my data source ?
  • Step-by-step procedure to restore a backup
  • Life cycle of a backup
  • Periodical summary of changes
• API access to data
  • Global scheme responses values
  • Aggregated responses
  • Per data source responses
  • Virus
  • Host
  • Data source
  • Accessing private data
• Administrator documentation
  • Running the demo
  • Deploying a local instance
  • Manage a local instance
• Glossary